| S.C.A.R.S | EU | 1999-01 |
Ubisoft | Commercial |
| SD Hiryuu no Ken Densetsu | JP | 1999-01 |
Culture Brain | Commercial |
| Star Wars - Rogue Squadron | EU | 1999-01-10 |
Nintendo | Commercial |
| Shadow Man | EU | 1999-03 |
Acclaim Entertainment | Commercial |
| Snowboard Kids 2 | US | 1999-03-01 |
Atlus | Commercial |
| Super Bowling | JP | 1999-03-26 |
UFO Interactive | Commercial |
| Super Smash Bros | US | 1999-04-26 |
Nintendo | Commercial |
| Snowboard Kids 2 | AU | 1999-04-30 |
Atlus | Commercial |
| Shadowgate 64 - Trials of the Four Towers | US | 1999-05 |
Kemco | Commercial |
| Superman - The New Superman Aventures | US | 1999-05 |
Titus | Commercial |
| South Park | DE | 1999-05-03 |
Acclaim Entertainment | Commercial |
| South Park | EU | 1999-05-03 |
Acclaim Entertainment | Commercial |
| Star Wars Episode I - Racer | US | 1999-05-18 |
LucasArts | Commercial |
| Superman | US | 1999-05-28 |
Titus | Prototype |
| Star Wars Episode I - Racer | EU | 1999-06-04 |
LucasArts | Commercial |
| Shadowgate 64 - Trials of the Four Towers | US | 1999-06-09 |
Kemco | Prototype |
| Starshot - Space Circus Fever | US | 1999-06-29 |
Infogrames | Commercial |
| Star Wars Episode I - Racer | JP | 1999-07-21 |
LucasArts | Commercial |
| Superman | EU | 1999-07-23 |
Titus | Commercial |
| Shadowgate 64 - Trials of the Four Towers | EU | 1999-07-30 |
Kemco | Commercial |
| Shadow Man | BR | 1999-08 |
Acclaim Entertainment | Commercial |
| Star Wars - Shutsugeki! Rogue Chuutai | JP | 1999-08 |
Nintendo | Commercial |
| Shadowgate 64 - Trials of the Four Towers | JP | 1999-08-13 |
Kemco | Commercial |
| Shadow Man | US | 1999-08-31 |
Acclaim Entertainment | Commercial |
| Shadow Man | DE | 1999-09-03 |
Acclaim Entertainment | Commercial |
| Shadow Man | EU | 1999-09-03 |
Acclaim Entertainment | Prototype |
| Shadow Man | FR | 1999-09-03 |
Acclaim Entertainment | Commercial |
| South Park - Chef's Luv Shack | EU | 1999-10 |
Acclaim Entertainment | Commercial |
| South Park - Chef's Luv Shack | US | 1999-10 |
Acclaim Entertainment | Commercial |
| Supercross 2000 | US | 1999-10 |
EA Sports | Commercial |
| Super Robot Taisen 64 | JP | 1999-10-29 |
Banpresto | Commercial |
| Sesame Street - Elmo's Letter Adventure | US | 1999-11 |
NewKidCo | Commercial |
| Sesame Street - Elmo's Number Journey | US | 1999-11 |
NewKidCo | Commercial |
| Super Smash Bros | AU | 1999-11-19 |
Nintendo | Commercial |
| Super Smash Bros | EU | 1999-11-19 |
Nintendo | Commercial |
| Space Invaders | US | 1999-11-30 |
Activision | Commercial |
| Star Twins | JP | 1999-12-01 |
Rareware | Commercial |